Publication 2020

LIST OF PUBLICATIONS IN PUBMED (2020)

1. Parray HA, Chiranjivi AK, Asthana S, Yadav N, Shrivastava T, Mani S, Sharma C, Vishwakarma P, Das S, Pindari K, Sinha S, Samal S, Ahmed S, Kumar R. Identification of an anti-SARS-CoV-2 receptor-binding domain-directed human monoclonal antibody from a naïve semisynthetic library. J Biol Chem. 2020 Sep 4;295(36):12814-12821. doi: 10.1074/jbc.AC120.014918. Epub 2020 Jul 29. PMID: 32727845.

2. Baidya G, Tiwary R, Mudassir M, Singh N, Saha S, Chosdol K, Sinha S, Chattopadhyay P. Passive internalization and active extrusion determines PLGA-nanoparticle concentration in cancer cell lines. Nanomedicine (Lond). 2020 Aug;15(23):2229-2239. doi: 10.2217/nnm-2020-0229. Epub 2020 Sep 14. PMID: 32924855

3. Prajapati B, Fatima M, Fatma M, Maddhesiya P, Arora H, Naskar T, Devasenapathy S, Seth P, Sinha S. Temporal transcriptome analysis of neuronal commitment reveals the preeminent role of the divergent lncRNA biotype and a critical candidate gene during differentiation. Cell Death Discov. 2020 Apr 24;6:28. doi: 10.1038/s41420-020-0263-6. eCollection 2020. PMID: 32351715.

4. Srivastava C, Irshad K, Gupta Y, Sarkar C, Suri A, Chattopadhyay P, Sinha S, Chosdol K. NFкB is a critical transcriptional regulator of atypical cadherin FAT1 in glioma. BMC Cancer. 2020 Jan 28;20(1):62. doi: 10.1186/s12885-019-6435-1. PMID: 31992226.

5. Parihar AS, Tembhre MK, Sharma VK, Gupta S, Chattopadhyay P, Deepak KK. Effect of narrowband ultraviolet B treatment on microRNA expression in active nonsegmental generalized vitiligo. Br J Dermatol. 2020 Jul;183(1):167-169. doi: 10.1111/bjd.18890. Epub 2020 Mar 11. PMID: 31975367.

6. Bhardwaj M, Sen S, Chosdol K, Bakhshi S, Pushker N, Sharma A, Kashyap S, Bajaj MS, Singh VK. Vimentin overexpression as a novel poor prognostic biomarker in eyelid sebaceous gland carcinoma. Br J Ophthalmol. 2020 Jun;104(6):879-884. doi: 10.1136/bjophthalmol-2018-313285. Epub 2019 Apr 2. PMID: 30940620.

7. Downregulation of Brain Enriched Type 2 MAGEs Is Associated With Immune Infiltration and Poor Prognosis in Glioma. Arora M, Kumari S, Singh J, Chopra A, Chauhan SS. Front Oncol. 2020 Dec 23;10:573378. doi: 10.3389/fonc.2020.573378. eCollection 2020. PMID: 33425727.

8. Arora M, Kumari S, Singh J, Chopra A, Chauhan SS. PAXX, Not NHEJ1 Is an Independent Prognosticator in Colon Cancer. Front Mol Biosci. 2020 Oct 23;7:584053. doi: 10.3389/fmolb.2020.584053. eCollection 2020. PMID: 33195430.

9. Fatima N, Ahmed SH, Chauhan SS, Mohammad O, Rehman SMF. Structural equation modelling analysis determining causal role among methyltransferases, methylation, and apoptosis during human pregnancy and abortion. Sci Rep. 2020 Jul 24;10(1):12408. doi: 10.1038/s41598-020-68270-1. PMID: 32709893.

10. Macha MA, Wani NA, Ganai RA, Bhat AA, Hamid A, Hashem S, Haris M, Chauhan SS, Zargar MA, Batra SK. Recent Advances in Head and Neck Tumor Microenvironment-Based Therapy. Adv Exp Med Biol. 2020;1296:11-31. doi: 10.1007/978-3-030-59038-3_2. PMID: 34185284.

11. Kaur A, Kharbanda OP, Rajeswari MR, Kalyanasundaram D. Levels of TGF-β1 in peri-miniscrew implant crevicular fluid. J Oral Biol Craniofac Res. 2020 Apr-Jun;10(2):93-98. doi: 10.1016/j.jobcr.2020.03.002. Epub 2020 Mar 6. PMID: 32211284.

12. Lohani N, Rajeswari MR. Antigene and Antiproliferative Effects of Triplex-Forming Oligonucleotide (TFO) Targeted on hmgb1 Gene in Human Hepatoma Cells. Anticancer Agents Med Chem. 2020;20(16):1943-1955. doi: 10.2174/1871520620666200619170438. PMID: 32560618.

13. Gupta N, Kumar R, Seth T, Garg B, Sharma A. Targeting of stromal versican by miR-144/199 inhibits multiple myeloma by downregulating FAK/STAT3 signalling. RNA Biol. 2020 Jan;17(1):98-111. PMID: 31532704.

14. Khandelwal M, Anand V, Appunni S, Seth A, Singh P, Mathur S, Sharma A. RASSF1A-Hippo pathway link in patients with urothelial carcinoma of bladder: plausible therapeutic target. Mol Cell Biochem. 2020 Jan;464(1-2):51-63. PMID: 31754973.

15. Saini C, Srivastava RK, Kumar P, Ramesh V, Sharma A. A distinct double positive IL-17A+/F+ T helper 17 cells induced inflammation leads to IL17 producing neutrophils in Type 1 reaction of leprosy patients. Cytokine. 2020 Feb;126:154873. PMID: 31629113.

16. Gupta N, Sharma A, Sharma A. Emerging biomarkers in Multiple Myeloma: A review. Clin Chim Acta. 2020 Apr;503:45-53. PMID: 31901479.

17. Yadav RK, Ali A, Kumar S, Sharma A, Baghchi B, Singh P, Das S, Singh C, Sharma S. CAR T cell therapy: newer approaches to counter resistance and cost. Heliyon. 2020 Apr 16;6(4):e03779. PMID: 32322738.

18. Kumar R, Himani, Gupta N, Singh V, Kumar V, Haq A, Mirza AA, Sharma A. Unveiling molecular associations of polymorphic variants of VDR gene (FokI, BsmI and ApaI) in multiple myeloma patients of Indian population. J Steroid Biochem Mol Biol. 2020 May;199:105588. PMID: 32004705.

19. Kaushik S, Gandhi S, Chauhan M, Ma S, Das S, Ghosh D, Chandrasekharan A, Alam MB, Parmar AS, Sharma A, Santhoshkumar TR, Suhag D. Water-Templated, Polysaccharide-rich Bioartificial 3D Microarchitectures as Extra-Cellular Matrix Bioautomatons. ACS Appl Mater Interfaces. 2020 May 6;12(18):20912-20921. PMID: 32255604.

20. Khandpur S, Sondhi P, Taneja N, Sharma P, Das D, Sharma A, Sreenivas V. Evaluation of adalimumab biosimilar in treatment of psoriatic arthritis with concomitant moderate to severe chronic plaque psoriasis: An open-labeled, prospective, pilot case series. J Am Acad Dermatol. 2020 Jul;83(1):248-251. PMID: 32087993.

21. Khandpur S, Singh A, Kumar A, Sharma A. A preliminary prospective non-randomized controlled trial to compare the efficacy of subcutaneous etanercept versus oral methotrexate in moderate-to-severe chronic plaque psoriasis and correlation of response with T helper (th) 1, th2, th17 and T regulatory cytokine patterns. Indian J Dermatol Venereol Leprol. 2020 Jul-Aug;86(4):441-445. PMID: 32496226.

22. Tarique M, Naz H, Saini C, Suhail M, Shankar H, Khanna N, Sharma A. Association of IL-10 Gene Polymorphism With IL-10 Secretion by CD4 and T Regulatory Cells in Human Leprosy. Front Immunol. 2020 Aug 6;11:1974. PMID: 32849660.

23. Saini C, Srivastava RK, Tarique M, Kurra S, Khanna N, Ramesh V, Sharma A. Elevated IL-6R on CD4+ T cells promotes IL-6 driven Th17 cell responses in patients with T1R leprosy reactions. Sci Rep. 2020 Sep 15;10(1):15143. PMID: 32934336.

24. Sharma JB, Deoghare MK, Bhatla N, Kachhawa G, Mahey R, Kumari R, Seth A, Sharma A. A comparative study of autologous rectus fascia pubovaginal sling surgery and synthetic transobturator vaginal tape procedure in treatment of women with urodynamic stress urinary incontinence. Eur J Obstet Gynecol Reprod Biol. 2020 Sep;252:349-354. PMID: 32659641.

25. Gupta SR, Sharma A, Gupta N, Mani K. Single nucleotide polymorphisms and serologic levels of hypoxia-inducible factor1 α and vascular endothelial growth factor are associated with increased risk of oral submucous fibrosis in gutka users among a North Indian population. Oral Surg Oral Med Oral Pathol Oral Radiol. 2020 Nov;130(5):557-564. PMID: 32981864.

26. Das D, Singh A, Antil PS, Sharma D, Arava S, Khandpur S, Sharma A. Distorted frequency of dendritic cells and their associated stimulatory and inhibitory markers augment the pathogenesis of pemphigus vulgaris. Immunol Res. 2020 Dec;68(6):353-362. PMID: 33184735.

27. Kumar S, Batra H, Singh S, Chawla H, Singh R, Katpara S, Hussain AW, Das BK, Lodha R, Kabra SK, Luthra K. Effect of combination antiretroviral therapy on human immunodeficiency virus 1 specific antibody responses in subtype-C infected children. J Gen Virol. 2020 Dec;101(12):1289-1299. doi: 10.1099/jgv.0.001480. Epub 2020 Sep 11. PMID: 32915123.

28. Mohan A, Ansari A, Masroor M, Saxena A, Pandey RM, Upadhyay A, Luthra K, Khilnani GC, Jain D, Kumar R, Guleria R. Measurement of Serum EGFR mRNA Expression is a Reliable Predictor of Treatment Response and Survival Outcomes in Non- Small Cell Lung Cancer. Asian Pac J Cancer Prev. 2020 Nov 1;21(11):3153-3163. doi: 10.31557/APJCP.2020.21.11.3153. PMID: 33247670.

29. Singh V, Nambirajan A, Malik PS, Thulkar S, Pandey RM, Luthra K, Arava S, Ray R, Mohan A, Jain D. Spectrum of uncommon and compound epidermal growth factor receptor mutations in non-small-cell lung carcinomas with treatment response and outcome analysis: A study from India. Lung Cancer. 2020 Nov;149:53-60. doi: 10.1016/j.lungcan.2020.07.038. Epub 2020 Sep 13. PMID: 32971387

30. Mishra N, Sharma S, Dobhal A, Kumar S, Chawla H, Singh R, Das BK, Kabra SK, Lodha R, Luthra K. A Rare Mutation in an Infant-Derived HIV-1 Envelope Glycoprotein Alters Interprotomer Stability and Susceptibility to Broadly Neutralizing Antibodies Targeting the Trimer Apex. J Virol. 2020 Sep 15;94(19):e00814-20. doi: 10.1128/JVI.00814-20. Print 2020 Sep 15. PMID: 32669335.

31. Mishra N, Sharma S, Dobhal A, Kumar S, Chawla H, Singh R, Makhdoomi MA, Das BK, Lodha R, Kabra SK, Luthra K. Broadly neutralizing plasma antibodies effective against autologous circulating viruses in infants with multivariant HIV-1 infection. Nat Commun. 2020 Sep 2;11(1):4409. doi: 10.1038/s41467-020-18225-x. PMID: 32879304.

32. Dey D, Jingar P, Agrawal S, Shrivastava V, Bhattacharya A, Manhas J, Garg B, Ansari MT, Mridha AR, Sreenivas V, Khurana A, Sen S. Symphytum officinale augments osteogenesis in human bone marrow-derived mesenchymal stem cells in vitro as they differentiate into osteoblasts. J Ethnopharmacol. 2020 Feb 10;248:112329. doi: 10.1016/j.jep.2019.112329. Epub 2019 Oct 28. PMID: 31672526.

33. Mandage R, Kaur C, Pramanik A, Kumar V, Kodan P, Singh A, Saha S, Pandey S, Wig N, Pandey RM, Soneja M, Acharya P. Association of Dengue Virus and Leptospira Co-Infections with Malaria Severity. Emerg Infect Dis. 2020 Aug;26(8):1645-1653. doi: 10.3201/eid2608.191214. PMID: 32687019.

34. Shalimar, Elhence A, Vaishnav M, Kumar R, Pathak P, Soni KD, Aggarwal R, Soneja M, Jorwal P, Kumar A, Khanna P, Singh AK, Biswas A, Nischal N, Dar L, Choudhary A, Rangarajan K, Mohan A, Acharya P, Nayak B, Gunjan D, Saraya A, Mahapatra S, Makharia G, Trikha A, Garg P. Poor outcomes in patients with cirrhosis and Corona Virus Disease-19. Indian J Gastroenterol. 2020 Jun;39(3):285-291. doi: 10.1007/s12664-020-01074-3. Epub 2020 Aug 15. PMID: 32803716.

35. Kaur C, Pramanik A, Kumari K, Mandage R, Dinda AK, Sankar J, Bagga A, Agarwal SK, Sinha A, Singh G, Acharya P. Renal detection of Plasmodium falciparum, Plasmodium vivax and Plasmodium knowlesi in malaria associated acute kidney injury: a retrospective case-control study. BMC Res Notes. 2020 Jan 20;13(1):37. doi: 10.1186/s13104-020-4900-1. PMID: 31959229.

36. Sathe G, George IA, Deb B, Jain AP, Patel K, Nayak B, Karmakar S, Seth A, Pandey A, Kumar P. Urinary glycoproteomic profiling of non-muscle invasive and muscle invasive bladder carcinoma patients reveals distinct N-glycosylation pattern of CD44, MGAM, and GINM1. Oncotarget. 2020 Aug 25;11(34):3244-3255. doi: 10.18632/oncotarget.27696. eCollection 2020 Aug 25. PMID: 32922663.

37. Karmakar S, Dhar R, Jee B. Covid-19: research methods must be flexible in a crisis. BMJ. 2020 Jul 6;370:m2668. doi: 10.1136/bmj.m2668. PMID: 32631850.

38. Bagri NK, Karmakar S, Haldar P, Lodha R, Kabra SK. Role of Serum MRP8/14 in Predicting Response to Methotrexate in Children With Juvenile Idiopathic Arthritis. J Clin Rheumatol. 2020 Jun 9. doi: 10.1097/RHU.0000000000001406. Online ahead of print. PMID: 32658390.

39. Sachan A, Singh A, Shukla S, Aggarwal S, Mir I, Yadav R. Serum Adipocytokines Levels and Their Association with Insulin Sensitivity in Morbidly Obese Individuals Undergoing Bariatric Surgery. J Obes Metab Syndr. 2020 Dec 30;29(4):303-312. doi: 10.7570/jomes20090. PMID: 33380577.

40. Astha S, Archna S, Sakshi S, Sandeep A, Ishfaq M, Rakhee Y. Study of Serum Adipocytokines and Their Association with Insulin Sensitivity in Morbidly Obese Individuals Undergoing Bariatric Surgery. J Obes Metab Syndr. 2020 Dec 14. doi: 10.7570/jomes20090. Online ahead of print. PMID: 33310973.

41. Kumar R, Krishnan A, Singh M, Singh UB, Singh A, Guleria R. Acceptability and Adherence to Peanut-Based Energy-Dense Nutritional Supplement Among Adult Malnourished Pulmonary Tuberculosis Patients in Ballabgarh Block of Haryana, India. Food Nutr Bull. 2020 Dec;41(4):438-445. doi: 10.1177/0379572120952306. Epub 2020 Sep 4. PMID: 32885665.

42. Singh J, Kumar R, Verma D, Rajput N, Palanichamy JK, Sharma G, Bakhshi S, Sharma A, Pushpam D, Seth R, Ranjan A, Tanwar P, Singh A, Arora M, Kumari S, Chopra A. MEF2C expression, but not absence of bi-allelic deletion of TCR gamma chains (ABD), is a predictor of patient outcome in Indian T-acute lymphoblastic leukemia. Am J Blood Res. 2020 Oct 15;10(5):294-304. eCollection 2020. PMID: 33224573.

43. Yadav R, Aggarwal S, Singh A. SARS-CoV-2-host dynamics: Increased risk of adverse outcomes of COVID-19 in obesity. Diabetes Metab Syndr. 2020 Sep-Oct;14(5):1355-1360. doi: 10.1016/j.dsx.2020.07.030. Epub 2020 Jul 21. PMID: 32755835.

44. Ghosh-Jerath S, Kapoor R, Singh A, Downs S, Barman S, Fanzo J. Leveraging Traditional Ecological Knowledge and Access to Nutrient-Rich Indigenous Foods to Help Achieve SDG 2: An Analysis of the Indigenous Foods of Sauria Paharias, a Vulnerable Tribal Community in Jharkhand, India. Front Nutr. 2020 Jun 2;7:61. doi: 10.3389/fnut.2020.00061. eCollection 2020. PMID: 32582750.

45. Vincent V, Thakkar H, Verma A, Sen A, Chandran N, Singh A. A novel flow cytometry-based quantitative monocyte adhesion assay to estimate endothelial cell activation in vitro. Biotechniques. 2020 Jun;68(6):325-333. doi: 10.2144/btn-2019-0169. Epub 2020 Apr 14. PMID: 32283953.

46. Thakkar H, Vincent V, Roy A, Singh S, Ramakrishnan L, Kalaivani M, Singh A. HDL functions and their interaction in patients with ST elevation myocardial infarction: a case control study. Lipids Health Dis. 2020 Apr 15;19(1):75. doi: 10.1186/s12944-020-01260-4. PMID: 32293456.

47. Naqvi AAT, Fatima K, Mohammad T, Fatima U, Singh IK, Singh A, Atif SM, Hariprasad G, Hasan GM, Hassan MI. Insights into SARS-CoV-2 genome, structure, evolution, pathogenesis and therapies: Structural genomics approach. Biochim Biophys Acta Mol Basis Dis. 2020 Oct 1;1866(10):165878. doi: 10.1016/j.bbadis.2020.165878. Epub 2020 Jun 13. PMID: 32544429.

48. Kant S, Kaur R, Ahamed F, Singh A, Malhotra S, Kumar R. Effectiveness of intravenous ferric carboxymaltose in improving hemoglobin level among postpartum women with moderate-to-severe anemia at a secondary care hospital in Faridabad, Haryana - An interventional study. Indian J Public Health. 2020 Apr-Jun;64(2):168-172. doi: 10.4103/ijph.IJPH_85_19. PMID: 32584300.

49. Gupta A, Bhatnagar V, Dhua AK, Jana M, Singh A, Malik R. Correlation of Hepatic Artery Resistive Index with Portal Pressure and Serum Nitric Oxide Levels in Patients with Extrahepatic Portal Vein Obstruction. J Indian Assoc Pediatr Surg. 2020 Jan-Feb;25(1):38-42. doi: 10.4103/jiaps.JIAPS_244_18. Epub 2019 Nov 27. PMID: 31896898.

50. Kaushik K, Palanichamy JK. Potential of Tiny RNAs as a Hope to Detect Parkinson's Disease. Ann Indian Acad Neurol. 2020 Jan-Feb;23(1):5. doi: 10.4103/aian.AIAN_634_19. Epub 2020 Jan 21. PMID: 32055111.

51. Jit BP, Qazi S, Arya R, Srivastava A, Gupta N, Sharma A. An immune epigenetic insight to COVID-19 infection. Epigenomics. 2021 Mar;13(6):465-480. doi: 10.2217/epi-2020-0349. Epub 2021 Mar 9. PMID: 33685230.

52. Kundu S. Mathematical model of a short translatable G-quadruplex and an assessment of its relevance to misfolding-induced proteostasis. Math Biosci Eng. 2020 Feb 25;17(3):2470-2493. doi: 10.3934/mbe.2020135. PMID: 32233549.