Publications-2015

2015

[1]  Singh HN, Rajeswari MR. Gene regulation by long purine tracks in brain related diseases. Data Brief. 2015 Sep 4;5:218-25. doi: 10.1016/j.dib.2015.08.024. eCollection 2015 Dec. PubMed PMID: 26543885; PubMed Central PMCID: PMC4589756.  

[2]     Kulshreshtha P, Tiwari A, Priyanka, Joon S, Sinha S, Bhatnagar R. Investigation of a panel of monoclonal antibodies and polyclonal sera against anthrax toxins resulted in identification of an anti-lethal factor antibody with  disease-enhancing characteristics. Mol Immunol. 2015 Dec;68(2 Pt A):185-93. doi:  10.1016/j.molimm.2015.07.019. Epub 2015 Sep 9. PubMed PMID: 26364143.  

[3]   Kumar M, Matta A, Masui O, Srivastava G, Kaur J, Thakar A, Shukla NK, RoyChoudhury A, Sharma M, Walfish PG, Michael Siu KW, Chauhan SS, Ralhan R. Nuclear heterogeneous nuclear ribonucleoprotein D is associated with poor prognosis and interactome analysis reveals its novel binding partners in oral cancer. J Transl Med. 2015 Aug 30;13:285. doi: 10.1186/s12967-015-0637-3. PubMed  PMID: 26318153; PubMed Central PMCID: PMC4553214.  

[4    Chaudhary O, Kumar S, Bala M, Singh J, Hazarika A, Luthra K. Association of DC-SIGNR Expression in Peripheral Blood Mononuclear Cells with DC-SIGNR Genotypes in HIV-1 Infection. Viral Immunol. 2015 Oct;28(8):472-5. doi: 10.1089/vim.2014.0148. Epub 2015 Aug 27. PubMed PMID: 26313015.  

[5]   Khalifa M, Noureen A, Ertelthalner K, Bandegi AR, Delport R, Firdaus WJ, Geethanjali FS, Luthra K, Makemaharn O, Pang RW, Salem AH, Sasaki J, Schiefenhoevel W, Lingenhel A, Kronenberg F, Utermann G, Schmidt K. Lack of association of rs3798220 with small apolipoprotein(a) isoforms and high lipoprotein(a) levels in East and Southeast Asians. Atherosclerosis. 2015 Oct;242(2):521-8. doi: 10.1016/j.atherosclerosis.2015.07.015. Epub 2015 Jul 15. PubMed PMID: 26302166.  

[6]     Khan I, Zakaria MK, Kumar M, Mani P, Chattopadhyay P, Sarkar DP, Sinha S. A novel placental like alkaline phosphatase promoter driven transcriptional silencing combined with single chain variable fragment antibody based virosomal delivery for neoplastic cell targeting [corrected]. J Transl Med. 2015 Aug 5;13:254. doi: 10.1186/s12967-015-0602-1. Erratum in: J Transl Med. 2015;13:300.  PubMed PMID: 26242403; PubMed Central PMCID: PMC4524171.  

[7]     Kundu S. Co-operative intermolecular kinetics of 2-oxoglutarate dependent dioxygenases may be essential for system-level regulation of plant cell physiology. Front Plant Sci. 2015 Jul 15;6:489. doi: 10.3389/fpls.2015.00489. eCollection 2015. PubMed PMID: 26236316; PubMed Central PMCID: PMC4502536.  

[8]     Bhardwaj M, Sen S, Sharma A, Kashyap S, Chosdol K, Pushker N, Bajaj MS, Bakhshi S. ZEB2/SIP1 as novel prognostic indicator in eyelid sebaceous gland carcinoma. Hum Pathol. 2015 Oct;46(10):1437-42. doi: 10.1016/j.humpath.2015.05.026. Epub 2015 Jun 10. PubMed PMID: 26220160.  

[9]     Singh HN, Rajeswari MR. Role of long purine stretches in controlling the expression of genes associated with neurological disorders. Gene. 2015 Nov 10;572(2):175-83. doi: 10.1016/j.gene.2015.07.007. Epub 2015 Jul 3. PubMed PMID:  26149656.  

[10] Luthra K. Antiviral activity of cystatin C against HIV. Indian J Med Res. 2015 Apr;141(4):383-4. doi: 10.4103/0971-5916.159242. PubMed PMID: 26112837; PubMed Central PMCID: PMC4510716.  

[11] Asothai R, Anand V, Das D, Antil PS, Khandpur S, Sharma VK, Sharma A. Distinctive Treg associated CCR4-CCL22 expression profile with altered frequency  of Th17/Treg cell in the immunopathogenesis of Pemphigus Vulgaris. Immunobiology. 2015 Oct;220(10):1129-35. doi: 10.1016/j.imbio.2015.06.008. Epub 2015 Jun 17. PubMed PMID: 26093920.  

[12] Singh S, Singh A, Sharma D, Singh A, Narula MK, Bhattacharjee J. Effect of l-Arginine on Nitric Oxide Levels in Intrauterine Growth Restriction and its Correlation with Fetal Outcome. Indian J Clin Biochem. 2015 Jul;30(3):298-304. doi: 10.1007/s12291-014-0450-4. Epub 2014 Jul 15. PubMed PMID: 26089616; PubMed Central PMCID: PMC4469053.  

[13] Kassab MA, Mudassir M, Singh A, N M, Bhagat M, Palanichamy JK, Ramalingam P,  Chosdol K, Sinha S, Chattopadhyay P. Gene Silencing and Activation of Human Papillomavirus 18 Is Modulated by Sense Promoter Associated RNA in Bidirectionally Transcribed Long Control Region. PLoS One. 2015 Jun 5;10(6):e0128416. doi: 10.1371/journal.pone.0128416. eCollection 2015. PubMed PMID: 26047143; PubMed Central PMCID: PMC4457724.  

[14]pan style="font:7.0pt "Times New Roman""> Khan L, Makhdoomi MA, Kumar S, Nair A, Andrabi R, Clark BE, Auyeung K, Bhattacharya J, Vajpayee M, Wig N, Pantophlet R, Luthra K. Identification of CD4-Binding Site Dependent Plasma Neutralizing Antibodies in an HIV-1 Infected Indian Individual. PLoS One. 2015 May 11;10(5):e0125575. doi: 10.1371/journal.pone.0125575. eCollection 2015. PubMed PMID: 25962059; PubMed Central PMCID: PMC4427266.  

[15] Kundu S. Unity in diversity, a systems approach to regulating plant cell physiology by 2-oxoglutarate-dependent dioxygenases. Front Plant Sci. 2015 Mar 11;6:98. doi: 10.3389/fpls.2015.00098. eCollection 2015. PubMed PMID: 25814993; PubMed Central PMCID: PMC4356072.  

[16] Irshad K, Mohapatra SK, Srivastava C, Garg H, Mishra S, Dikshit B, Sarkar C,  Gupta D, Chandra PS, Chattopadhyay P, Sinha S, Chosdol K. A combined gene signature of hypoxia and notch pathway in human glioblastoma and its prognostic relevance. PLoS One. 2015 Mar 3;10(3):e0118201. doi: 10.1371/journal.pone.0118201. eCollection 2015. PubMed PMID: 25734817; PubMed Central PMCID: PMC4348203.  

[17] Bure D, Makhdoomi MA, Lodha R, Prakash SS, Kumar R, Parray HA, Singh R, Kabra SK, Luthra K. Mutations in the reverse transcriptase and protease genes of human  immunodeficiency virus-1 from antiretroviral naïve and treated pediatric patients. Viruses. 2015 Feb 10;7(2):590-603. doi: 10.3390/v7020590. PubMed PMID:  25674767; PubMed Central PMCID: PMC4353905.  

[18] Loying P, Manhas J, Sen S, Bose B. Autoregulation and heterogeneity in expression of human Cripto-1. PLoS One. 2015 Feb 6;10(2):e0116748. doi: 10.1371/journal.pone.0116748. eCollection 2015. PubMed PMID: 25658584; PubMed Central PMCID: PMC4319928.  

[19] Gupta N, Khan R, Kumar R, Kumar L, Sharma A. Versican and its associated molecules: potential diagnostic markers for multiple myeloma. Clin Chim Acta. 2015 Mar 10;442:119-24. doi: 10.1016/j.cca.2015.01.012. Epub 2015 Jan 23. PubMed  PMID: 25623955.  

[20] Kumar M, Srivastava G, Kaur J, Assi J, Alyass A, Leong I, MacMillan C, Witterick I, Shukla NK, Thakar A, Duggal R, Roychoudhury A, Sharma MC, Walfish PG, Chauhan SS, Ralhan R. Prognostic significance of cytoplasmic S100A2 overexpression in oral cancer patients. J Transl Med. 2015 Jan 16;13:8. doi: 10.1186/s12967-014-0369-9. PubMed PMID: 25591983; PubMed Central PMCID: PMC4324434.  

[21] Kumar M, Khan I, Sinha S. Nature of immobilization surface affects antibody specificity to placental alkaline phosphatase. J Immunoassay Immunochem. 2015;36(4):405-13. doi: 10.1080/15321819.2014.973117. PubMed PMID: 25321174.  

[22] Lohani N, Narayan Singh H, Agarwal S, Mehrotra R, Rajeswari MR. Interaction of adriamycin with a regulatory element of hmgb1: spectroscopic and calorimetric  approach. J Biomol Struct Dyn. 2015;33(8):1612-23. doi: 10.1080/07391102.2014.967301. Epub 2014 Oct 14. PubMed PMID: 25311659.  

[23] Khatri R, Akhtar N, Mukhopadhyay K, Verma KK, Sethuraman G, Sharma A. Genetic endowment of proinflammatory cytokine tumor necrosis factor-α (-) 308 G > A polymorphism to Parthenium hysterophorus-induced airborne contact dermatitis in an Indian cohort. Int J Dermatol. 2015 Feb;54(2):179-84. doi: 10.1111/ijd.12255.  Epub 2014 Feb 14. PubMed PMID: 24673179.

[24] Ahirwar AK, Jain A, Singh A, Goswami B, Bhatnagar MK, Bhatacharjee J. The study of markers of endothelial dysfunction in metabolic syndrome. Horm Mol Biol Clin Investig. 2015 Dec;24(3):131-6. doi: 10.1515/hmbci-2015-0039. PubMed PMID:26516933.

[25] Ghosh-Jerath S, Devasenapathy N, Singh A, Shankar A, Zodpey S. Ante natal care (ANC) utilization, dietary practices and nutritional outcomes in pregnant and recently delivered women in urban slums of Delhi, India: an exploratory cross-sectional study. Reprod Health. 2015 Mar 20;12:20. doi: 10.1186/s12978-015-0008-9. PubMed PMID: 25889714; PubMed Central PMCID:PMC4396888.

[26] Mir RA, Bele A, Mirza S, Srivastava S, Olou AA, Ammons SA, Kim JH, Gurumurthy CB, Qiu F, Band H, Band V. A Novel Interaction of Ecdysoneless (ECD) Protein with R2TP Complex Component RUVBL1 Is Required for the Functional Role of ECD in Cell  Cycle Progression. Mol Cell Biol. 2015 Dec 28;36(6):886-99. doi: 10.1128/MCB.00594-15. PubMed PMID: 26711270; PubMed Central PMCID: PMC4810467.

[27] Singh N, Gupta S, Pandey RM, Chauhan SS, Saraya A. High levels of cell-free circulating nucleic acids in pancreatic cancer are associated with vascular encasement, metastasis and poor survival. Cancer Invest. 2015 Mar;33(3):78-85.doi: 10.3109/07357907.2014.1001894. Epub 2015 Feb 3. PubMed PMID: 25647443.

[28] Tembhre MK, Parihar AS, Sharma A, Gupta S, Chattopadhyay P, Sharma VK. Participation of T cell immunoglobulin and mucin domain-3 (TIM-3) and its ligand (galectin-9) in the pathogenesis of active generalized vitiligo. Immunol Res.2015 May;62(1):23-34. doi: 10.1007/s12026-015-8632-6. PubMed PMID: 25784621.

[29] Rodríguez-Malavé NI, Fernando TR, Patel PC, Contreras JR, Palanichamy JK, Tran TM, Anguiano J, Davoren MJ, Alberti MO, Pioli KT, Sandoval S, Crooks GM, Rao DS. BALR-6 regulates cell growth and cell survival in B-lymphoblastic leukemia. Mol Cancer. 2015 Dec 22;14:214. doi: 10.1186/s12943-015-0485-z. PubMed PMID:26694754; PubMed Central PMCID: PMC4688921