Dr. Bhupendra Kumar Verma's Lab
(Laboratory of Molecular Biology & Virology)
(Laboratory of Molecular Biology & Virology)
Publications
Google Scholar ID:
https://scholar.google.com/citations?user=VkkZ9xAAAAAJ&hl=en
Scopus ID:
https://orcid.org/0000-0003-1731-5335
- Madhry, D., Kumari, K., Meena, V., Roy, R., & Verma, B. (2024). Unravelling tRNA Fragments in DENV Pathogenesis: Insights from RNA Sequencing. Scientific Reports, 14(1), 18357. IF: 3.8
- Sinha, S., Singh, K., Ravi Kumar, Y.S., Roy, R., Phadnis, S., Meena, V., Bhattacharyya, S. and Verma, B. (2024). Dengue virus pathogenesis and host molecular machineries. Journal of Biomedical Science, 31(1), p.43. IF: 11.0
- Kumari, K., Afroj, S., Madhry, D., Verma, Y., Kairo, A, K., Thakar, A., Sikka, K., Verma, H., & Verma, B. (2024). Comprehensive Analysis of Juvenile Nasopharyngeal Angiofibromas via Whole Exome Sequencing. Genes, Chromosome and Cancer, DOI: 10.1002/gcc.23265. IF: 3.1
- Sankar, A., Ravi Kumar Y,S., Singh, A., Roy, R., Shukla, R., & Verma, B. (2024). Next-Generation Therapeutics for Rare Genetic Disorders. Mutagenesis, 39(1), 157-171. IF : 2.8
- Madhry, D., Malvankar, S., Phadnis, S., Srivastava, R. K., Bhattacharyya, S., & Verma, B. (2023). Synergistic correlation between host angiogenin and Dengue virus replication. RNA biology, 20(1), 805-816. IF : 4.7
- Malvankar, S., Singh, A., Ravi Kumar Y,S., Sahu, S., Shah, M., Murghai, Y., Seervi, M., Srivastava, R, K., & Verma, B. (2023). Modulation of various host cellular machinery during COVID-19 infection Reviews in Medical Virology, e2481. IF : 11.1
- Singh, A., Pandey, K.K., Kumar, S., Srivastava, R. K., & Verma, B. (2023). The SARS CoV-2 UTR’s Intrudes host RBPs and Modulates Cellular Splicing Advances in Virology. Apr 5;2023. IF : 2.2
- Rai S, Bharti PS, Singh R, Rastogi S, Rani K, Sharma V, Gorai PK, Rani N, Verma BK , Reddy TJ, Modi GP, Inampudi KK, Pandey HC, Yadac S, Rajan R, Nikolajeff F, and Kumar S.(2023) Circulating plasma miR-23b-3p as a biomarker target for idiopathic Parkinson's disease: comparison with small extracellular vesicle miRNA. Frontiers in Neuroscience. 2023;17. IF: 4.3
- Singh, A., Malvankar, S., Kumar, Y. R., Seervi, M., Srivastava, R. K., & Verma, B. (2022). Role of various non-coding RNAs in EMT, cancer, and metastasis: Recent trends and future perspective. Advances in Cancer Biology-Metastasis, 100039. IF: 2.0
- Siddappa, R. Y., Aditya Rao, S. J., Usha, B. M., Verma, B., & Mahadevappa, P. (2022). Anti-proliferative Activity of Labdane Diterpenes Isolated from Polyalthia cerasoides and their Molecular Interaction Studies. Current Drug Discovery Technologies, 19(5), 78-85. IF: 1.6
- Bhardwaj, A., Sapra, L., Saini, C., Azam, Z., Mishra, P.K., Verma, B.,Mishra GC, Srivastava R.K. (2022). COVID-19: immunology, immunopathogenesis and potential therapies. International reviews of immunology 2022 Feb 21;41(2):171-206 IF : 5.0
- Pandey, K.K., Madhry, D., Ravi Kumar Y.S., Malvankar, S., Sapra, L., Srivastava, R., Bhattacharyya, S., and Verma, B (2021). Regulatory roles of tRNA-derived RNA fragments in human pathophysiology. Molecular Therapy- Nucleic Acids, 26, 161-173. IF-10.1
- Madhrey, D., Pandey, K,K., Kaur, J., Rawat, Y., Sapra, Y., Ravikumar Y. S., Srivastava, R., Bhattacharyya, S., and Verma, B (2021). Role of non-coding RNAs in Dengue virus-host interaction. Frontiers in Bioscience. 13 (1), 44–55. IF-4.0
- Sapra, L., Bhardwaj, A., Azam, Z., Madhry, D., Verma, B., Rathore S, Srivastava RK. (2021). Phytotherapy for treatment of cytokine storm in COVID-19. Frontiers In Bioscience, Landmark.. 2021 Apr 30;26(5):51-75 IF : 4.0
- Verma, B., Akinyi, M., Norppa, A., and Frilander, M. J. (2018). Minor splicing and diseases. Seminar in Cell and Developmental Biology, 79, 103-112. IF-7.3
- Norppa, A., Kauppala, T.M., Heikkinen, H.A., Verma B, Iwai, H. and Frilander, M. J. (2018). Mutations in the U11/U12-65K protein associated with isolated growth hormone deficiency lead to structural destabilization and impaired binding of U12 snRNA. RNA, 24(3), 396-409. IF-4.0
- Verbeeren, J., Verma, B., Niemela, EH., Yap, K., Makeyev, EV., and Frilander, MJ. (2017) Alternate 3’-terminal exon definition events control the choice between retention of U11/U12-65K mRNA in the nucleus and its export to the cytoplasm. PLOS Genetics. 13, e1006824. IF-5.1
- Argente, J., Flores, R., Gutiérrez-Arumí, A≠., Verma, B≠., Martos-Moreno, G.A., Cuscó, I.,
Oghabian, A., Chowen, J.A., Frilander, M.J., and Pérez-Jurado, L.A. (2014). Defective minor spliceosome mRNA processing results in isolated familial
growth hormone deficiency. EMBO Molecular Medicine. 6 (3), 299-306. IF-11.1
(≠ Equal contribution). - Turunen, J. J., Verma, B., Nyman, T. A., & Frilander, M. J. (2013). HnRNPH1/H2, U1 snRNP, and U11 snRNP cooperate to regulate the stability of the U11-48K pre-mRNA. RNA, 19(3), 380-389. IF-4.0
- Turunen, J. J., Niemelä, E. H., Verma, B., & Frilander, M. J. (2013). The significant other: splicing by the minor spliceosome. Wiley Interdisciplinary Reviews: RNA, 4(1), 61-76. IF-7.3
- Verma, B., Ponnuswamy, A., Gnanasundram, S.V. and Das, S. (2011). Cryptic AUG is important for 48S ribosomal assembly during internal initiation of Coxsackievirus B3 RNA. Journal of General Virology. 92, 2310 - 2319. IF-5.1
- Verma, B., Bhattacharyya, S. and Das, S. (2010). Polypyrimidine tract binding protein interacts with Coxsackievirus B3 RNA and influences its translation. Journal of General Virology. 91, 1245-1255. IF-5.1
- Bhattacharyya, S1.,Verma, B1., Pandey, G. and Das, S. (2008). The structure and function of a cis-acting element located upstream of the IRES that influences Coxsackievirus B3 RNA translation. Virology.377(2):345-354 (Joint first author). IF-4.8
Book Chapters/Newsletters/Blogs
- Sinha, S., Phadnis, S., Roy, R., Singh, K., and Verma, B (2023). Immunotherapeutics & Viral Infections: Advances and Key Challenges (invited review). Immune Connect; Indian Immunological Society (IIS) 1st Newsletter.
- Meena, V., Sinha, S., and Verma, B (2022). Role of small non-coding RNAs in Reproductive Health (invited review). Indian Society for Study of Reproduction and Fertility (ISSRF) 28th Newsletter (ISSN # 2395-2806).
- Madhrey, D., Pandey, K. K., Malvankar, S., Kumar, S., Singh, A., Ravikumar Y. S., Srivastava, R., and Verma, B (2021). Various Transcriptomic approaches & their applications to study small non-coding RNAs in Dengue and other viruses. Book Chapter in press (Springer Nature book titled "Integrated-omics approaches to infectious disease")
- Singh, A., Malvankar, S., Pandey, K.K., Kumar, S., Srivastava, R., and Verma, B. (2021). Transcriptomics Approaches To Study Role Of Ncrnas In Reproductive Health (invited review). Indian Society for Study of Reproduction and Fertility (ISSRF) 27th Newsletter (ISSN # 2395-2806).
- Malvankar, S., Madhrey, D., and Verma, B (2020). Nano-delivery of small non-coding RNA as a therapeutic approach to treat Reproductive Diseases (invited review). Indian Society for Study of Reproduction and Fertility (ISSRF) 25th Newsletter (ISSN # 2395-2806).
- Madhrey, D., Ravikumar Y. S. and Verma, B (2019). tRNA derived RNA fragments: ncRNAs and reproductive health, (invited review). Indian Society for Study of Reproduction and Fertility (ISSRF) 24th Newsletter (2019, Sep., 24, 52-54), (ISSN # 2395-2806).
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Invited blog article in Nature India (April 2013).
Away from home: Coping with Northern lights & darkness: Blog talking about my own scientific research and life as a postdoctoral researcher in Finland. url: http://blogs.nature.com/indigenus/2013/04/away-from-home-coping-with-northern-lights-darkness.html